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(1) Xia Mingze, Li Yan, Zhang Faqi *, Yu Jingya, Gulzar Khan, Chi Xiaofeng, Xu Hao, Chen Shilong*. Reassessment of the Phylogeny and Systematics of Chinese Parnassia (Celastraceae):A Thorough Investigation Using Whole Plastomes and Nuclear Ribosomal DNA, Frontiers in Plant Science 13: 855944, 2022.
(2) Yu Jingya, Xia Mingze, Wang Yongcui, Chi Xiaofeng, Xu Hao, Chen Shilong, Zhang Faqi*. Short and long reads chloroplast genome assemblies and phylogenomics of Artemisia tangutica (Asteraceae). Biologia 77: 915–930, 2022.
(3) Li Qing, Xia Mingze, Yu Jingya, Chen Shilong, Zhang Faqi*. Plastid genome insight to the taxonomic problem for Aconitum pendulum and A. flavum (Ranunculaceae). Biologia 77: 953–966, 2022.
(4) ZhangYu, Yu Jingya, Xia Mingze, Chi Xiaofeng, Khan Gulzar, Chen Shilong, Zhang Faqi*. Plastome sequencing reveals phylogenetic relationships among Comastoma and related taxa (Gentianaceae)from the Qinghai-Tibetan Plateau, Ecology and Evolution 11(22): 16034-16046, 2021.
(5) Xia Mingza, Tian Zunzhe, Zhang Faqi*, Khan Gulzar, Gao Qingbo, Xing Rui, Zhang Yu, Yu Jingya, Chen Shilong*. Deep Intraspecific Divergence in the Endemic Herb Lancea tibetica (Mazaceae) Distributed Over the Qinghai-Tibetan Plateau. Frontiers in Genetics 9: 492, 2018.
(6) Khan Gulzar, Zhang Faqi*, Gao Qingbo, Fu Pengcheng, Zhang Yu, Chen Shilong*. Spiroides shrubs on Qinghai-Tibetan Plateau: Multilocus phylogeography and palaeodistributional reconstructionof Spiraea alpina and S. mongolica (Rosaceae), Molecular Phylogenetics and Evolution 123: 137-148, 2018.
(7) Zhigzhitzhapova S.V., Radnaeva L.D., Gao Qingbo, Chen Shilong, Zhang Faqi*. Chemical composition of volatile organic compounds of Artemisia vulgaris L. (Asteraceae) from the Qinghai-Tibet Plateau, Industrial Crops and Products 83: 462-469, 2016.
(8) Zhang Faqi, Li Yinhu, Gao Qingbo, Lei Shuyun, Gulzar Khan, Yang Huiling, Chen Shilong*. Development and characterization of polymorphic microsatellite loci for Saxifraga egregia (Saxifragaceae). Applications in Plant Sciences 3(8): 1500037, 2015.
(9) Zhang Faqi, Gao Qingbo, Gulzar Khan, LuoKeming, Chen Shilong. Comparative transcriptome analysis of aboveground and underground tissues of Rhodiola algida, an important ethno-medicinal herb endemic to the Qinghai-Tibetan Plateau, Gene 553: 90–97, 2014.
(10) Zhang Faqi, Gao Qingbo, Zhang Dejun, Duan Yizhong, Li Yinhu, Fu Pengcheng, Xing Rui, Gulzar Khan, Chen Shilong*. Phylogeography of Spiraea alpina (Rosaceae) in the Qinghai-Tibetan Plateau inferred from chloroplast DNA sequence variations, Journal of Systematics and Evolution 50(4): 276-283, 2012.